Sequence Similarity Clusters for the Entities in PDB 1JXP

Entity #1 | Chains: A,B
NS3 SERINE PROTEASE protein, length: 186 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 15489
95 % 15 25 722 Flexibility: Low
Max RMSD: 8.3, Avg RMSD: 1.3
PDBFlex
90 % 15 25 752
70 % 54 89 243
50 % 54 89 261
40 % 54 89 275
30 % 54 89 283
Entity #2 | Chains: C,D
NS4A protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.