Sequence Similarity Clusters for the Entities in PDB 1JXP

Entity #1 | Chains: A,B
NS3 SERINE PROTEASE protein, length: 186 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 15864
95 % 15 25 742 Flexibility: Low
Max RMSD: 8.3, Avg RMSD: 1.3
PDBFlex
90 % 15 25 773
70 % 54 89 248
50 % 54 89 267
40 % 54 89 279
30 % 54 89 291
Entity #2 | Chains: C,D
NS4A protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures