Sequence Similarity Clusters for the Entities in PDB 1JXO

Entity #1 | Chains: A,B
postsynaptic density protein protein, length: 301 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 19495
95 % 3 3 17305 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 3 3 16963
70 % 3 3 15779
50 % 4 5 9988
40 % 4 5 9089
30 % 4 5 7961

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures