Sequence Similarity Clusters for the Entities in PDB 1JXN

Entity #1 | Chains: A,B,C,D
anti-H(O) lectin I protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 13217
95 % 2 2 12719 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 2 2 12537
70 % 2 2 11822
50 % 39 88 185
40 % 89 161 102
30 % 89 161 114

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures