Sequence Similarity Clusters for the Entities in PDB 1JXM

Entity #1 | Chains: A
POSTSYNAPTIC DENSITY PROTEIN protein, length: 301 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 18623
95 % 2 3 16556 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 2 3 16222
70 % 2 3 15097
50 % 3 5 9585
40 % 3 5 8718
30 % 3 5 7627

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.