Sequence Similarity Clusters for the Entities in PDB 1JX9

Entity #1 | Chains: A
penicillin G acylase alpha subunit protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 20 2510
95 % 14 21 2944 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 14 21 2993
70 % 14 21 2964
50 % 14 22 2791
40 % 14 22 2749
30 % 14 22 2576
Entity #2 | Chains: B
penicillin G acylase beta subunit protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 25196
95 % 17 24 2391 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 17 24 2454
70 % 17 26 1750
50 % 17 27 1734
40 % 17 29 1636
30 % 17 29 1607

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.