Sequence Similarity Clusters for the Entities in PDB 1JWI

Entity #1 | Chains: A
bitiscetin protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 45881
95 % 1 2 38214 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 2 36441
70 % 1 2 32323
50 % 10 29 1297
40 % 22 65 535
30 % 145 296 47
Entity #2 | Chains: B
platelet aggregation inducer protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 45879
95 % 1 2 38212 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 2 36439
70 % 1 2 32321
50 % 1 2 27472
40 % 23 65 535
30 % 146 296 47

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures