Sequence Similarity Clusters for the Entities in PDB 1JWI

Entity #1 | Chains: A
bitiscetin protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 46793
95 % 1 2 35072 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 2 33485
70 % 1 2 29813
50 % 10 28 1311
40 % 20 60 646
30 % 96 220 107
Entity #2 | Chains: B
platelet aggregation inducer protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 47222
95 % 1 2 35335 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 2 33737
70 % 1 2 30012
50 % 1 2 25585
40 % 21 60 646
30 % 97 220 107

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures