Sequence Similarity Clusters for the Entities in PDB 1JWI

Entity #1 | Chains: A
bitiscetin protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 43988
95 % 1 2 33054 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 2 31621
70 % 1 2 28275
50 % 10 27 1422
40 % 20 58 699
30 % 96 218 100
Entity #2 | Chains: B
platelet aggregation inducer protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 44398
95 % 1 2 33306 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 2 31864
70 % 1 2 28469
50 % 1 2 24352
40 % 21 58 699
30 % 97 218 100

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.