Sequence Similarity Clusters for the Entities in PDB 1JWH

Entity #1 | Chains: A,B
Casein kinase II, alpha chain protein, length: 337 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 61 61 392
95 % 96 97 248 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.0
PDBFlex
90 % 96 97 264
70 % 141 143 179
50 % 147 149 214
40 % 147 149 232
30 % 3887 3966 2
Entity #2 | Chains: C,D
Casein kinase II beta chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 2256
95 % 6 7 2602 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.8
PDBFlex
90 % 6 7 2661
70 % 6 7 2650
50 % 6 7 2619
40 % 6 7 2573
30 % 6 7 2433

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures