Sequence Similarity Clusters for the Entities in PDB 1JWH

Entity #1 | Chains: A,B
Casein kinase II, alpha chain protein, length: 337 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 61 61 368
95 % 96 97 240 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.0
PDBFlex
90 % 96 97 255
70 % 139 141 179
50 % 145 147 210
40 % 145 147 230
30 % 3807 3886 2
Entity #2 | Chains: C,D
Casein kinase II beta chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 2183
95 % 6 7 2527 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.8
PDBFlex
90 % 6 7 2583
70 % 6 7 2572
50 % 6 7 2544
40 % 6 7 2505
30 % 6 7 2378

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.