Sequence Similarity Clusters for the Entities in PDB 1JWH

Entity #1 | Chains: A,B
Casein kinase II, alpha chain protein, length: 337 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 58 58 397
95 % 93 94 236 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.0
PDBFlex
90 % 93 94 250
70 % 136 138 181
50 % 142 144 211
40 % 142 144 232
30 % 3674 3751 2
Entity #2 | Chains: C,D
Casein kinase II beta chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 2093
95 % 6 7 2442 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.7
PDBFlex
90 % 6 7 2500
70 % 6 7 2489
50 % 6 7 2461
40 % 6 7 2424
30 % 6 7 2303

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.