Sequence Similarity Clusters for the Entities in PDB 1JWG

Entity #1 | Chains: A,B
ADP-ribosylation factor binding protein GGA1 protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 10 2381
95 % 4 10 3031 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 0.7
PDBFlex
90 % 4 10 3078
70 % 4 13 1769
50 % 4 14 1690
40 % 4 14 1708
30 % 4 14 1672
Entity #2 | Chains: C,D
Cation-independent mannose-6-phosphate receptor protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures