Sequence Similarity Clusters for the Entities in PDB 1JWB

Entity #1 | Chains: B
MOLYBDOPTERIN BIOSYNTHESIS MOEB PROTEIN protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 29949
95 % 2 3 26116 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 3 25201
70 % 2 3 22827
50 % 2 3 19597
40 % 3 6 4835
30 % 3 6 4327
Entity #2 | Chains: D
MOLYBDOPTERIN [MPT] CONVERTING FACTOR, SUBUNIT 1 protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 10900
95 % 5 7 10561 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.2
PDBFlex
90 % 5 7 10415
70 % 5 7 9841
50 % 5 7 8877
40 % 5 7 8054
30 % 6 8 5805

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures