Sequence Similarity Clusters for the Entities in PDB 1JWA

Entity #1 | Chains: B
MOLYBDOPTERIN BIOSYNTHESIS MOEB PROTEIN protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 26987
95 % 3 3 22566 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 3 3 21910
70 % 3 3 20108
50 % 3 3 17426
40 % 4 6 4520
30 % 4 6 4148
Entity #2 | Chains: D
MOLYBDOPTERIN [MPT] CONVERTING FACTOR, SUBUNIT 1 protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 13981
95 % 7 7 10769 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.2
PDBFlex
90 % 7 7 10634
70 % 7 7 10104
50 % 7 7 9137
40 % 7 7 8361
30 % 7 7 7362

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.