Sequence Similarity Clusters for the Entities in PDB 1JW6

Entity #1 | Chains: A
Concanavalin A protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 25 57 176
95 % 33 84 141 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.7
PDBFlex
90 % 33 88 147
70 % 41 110 139
50 % 41 110 166
40 % 41 110 182
30 % 41 110 196
Entity #2 | Chains: B
PROTEIN (6-MER) protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.