Sequence Similarity Clusters for the Entities in PDB 1JW0

Entity #1 | Chains: A
cephalosporin acylase alpha chain protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 10812
95 % 10 13 4271 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.3
PDBFlex
90 % 10 13 4301
70 % 10 13 4231
50 % 10 13 4066
40 % 10 13 3890
30 % 10 13 3619
Entity #2 | Chains: B
cephalosporin acylase beta chain protein, length: 520 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 25854
95 % 10 13 3963 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 10 13 4004
70 % 10 13 3960
50 % 10 13 3847
40 % 10 13 3696
30 % 10 13 3453

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures