Sequence Similarity Clusters for the Entities in PDB 1JW0

Entity #1 | Chains: A
cephalosporin acylase alpha chain protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 11015
95 % 10 13 4337 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.3
PDBFlex
90 % 10 13 4375
70 % 10 13 4295
50 % 10 13 4127
40 % 10 13 3939
30 % 10 13 3669
Entity #2 | Chains: B
cephalosporin acylase beta chain protein, length: 520 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 26249
95 % 10 13 4031 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 10 13 4076
70 % 10 13 4025
50 % 10 13 3909
40 % 10 13 3749
30 % 10 13 3502

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures