Sequence Similarity Clusters for the Entities in PDB 1JVZ

Entity #1 | Chains: A
cephalosporin acylase alpha chain protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 11033
95 % 13 13 4342 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.3
PDBFlex
90 % 13 13 4381
70 % 13 13 4301
50 % 13 13 4132
40 % 13 13 3942
30 % 13 13 3674
Entity #2 | Chains: B
cephalosporin acylase beta chain protein, length: 520 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 26287
95 % 13 13 4035 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 13 13 4081
70 % 13 13 4030
50 % 13 13 3913
40 % 13 13 3751
30 % 13 13 3505

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures