Sequence Similarity Clusters for the Entities in PDB 1JVZ

Entity #1 | Chains: A
cephalosporin acylase alpha chain protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 10625
95 % 13 13 4195 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.3
PDBFlex
90 % 13 13 4228
70 % 13 13 4160
50 % 13 13 4002
40 % 13 13 3831
30 % 13 13 3569
Entity #2 | Chains: B
cephalosporin acylase beta chain protein, length: 520 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 25370
95 % 13 13 3897 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 13 13 3942
70 % 13 13 3897
50 % 13 13 3790
40 % 13 13 3641
30 % 13 13 3402

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.