Sequence Similarity Clusters for the Entities in PDB 1JVQ

Entity #1 | Chains: I,L
ANTITHROMBIN-III protein, length: 432 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 22 1065
95 % 5 34 984 Flexibility: Medium
Max RMSD: 20.1, Avg RMSD: 6.9
PDBFlex
90 % 5 34 1012
70 % 5 35 1010
50 % 5 35 1049
40 % 5 35 1066
30 % 100 178 180
Entity #2 | Chains: C
P14-P8 reactive loop peptide protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: D
exogenous Cholecystokinin tetrapeptide protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.