Sequence Similarity Clusters for the Entities in PDB 1JVO

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
Azurin protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 4058
95 % 91 94 111 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.8
PDBFlex
90 % 92 95 114
70 % 104 107 101
50 % 112 116 131
40 % 112 116 147
30 % 112 116 162

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.