Sequence Similarity Clusters for the Entities in PDB 1JVK

Entity #1 | Chains: A,B
IMMUNOGLOBULIN LAMBDA LIGHT CHAIN protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 12801
95 % 2 3 12329 Flexibility: Medium
Max RMSD: 9.6, Avg RMSD: 6.0
PDBFlex
90 % 15 75 259
70 % 563 2287 1
50 % 1159 4633 1
40 % 1159 4633 1
30 % 1288 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.