Sequence Similarity Clusters for the Entities in PDB 1JVK

Entity #1 | Chains: A,B
IMMUNOGLOBULIN LAMBDA LIGHT CHAIN protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 12605
95 % 2 3 12133 Flexibility: Medium
Max RMSD: 9.6, Avg RMSD: 6.0
PDBFlex
90 % 14 72 262
70 % 558 2264 1
50 % 1149 4587 1
40 % 1149 4587 1
30 % 1272 5392 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.