Sequence Similarity Clusters for the Entities in PDB 1JVI

Entity #1 | Chains: A
Autoinducer-2 production protein luxS protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28410
95 % 6 7 10555 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 6 7 10420
70 % 6 7 9909
50 % 6 7 8973
40 % 6 7 8216
30 % 6 7 7244

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.