Sequence Similarity Clusters for the Entities in PDB 1JV5

Entity #1 | Chains: A
Ig kappa chain precursor V region protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 68415
95 % 3 4 13111 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.2
PDBFlex
90 % 3 8 6420
70 % 85 191 72
50 % 128 305 21
40 % 372 916 5
30 % 418 1042 7
Entity #2 | Chains: B
Ig chain heavy chain precursor V region protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67431
95 % 1 1 46454
90 % 1 1 44079
70 % 22 82 259
50 % 229 566 7
40 % 373 916 5
30 % 419 1042 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.