Sequence Similarity Clusters for the Entities in PDB 1JV5

Entity #1 | Chains: A
Ig kappa chain precursor V region protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 67435
95 % 3 4 12928 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 3 8 6345
70 % 85 188 71
50 % 127 302 22
40 % 360 887 5
30 % 406 1013 7
Entity #2 | Chains: B
Ig chain heavy chain precursor V region protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66475
95 % 1 1 45747
90 % 1 1 43422
70 % 22 82 258
50 % 218 540 8
40 % 361 887 5
30 % 407 1013 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.