Sequence Similarity Clusters for the Entities in PDB 1JV4

Entity #1 | Chains: A
Major urinary protein 2 protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 13 4395
95 % 10 20 3193 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 12 22 2902
70 % 16 28 1872
50 % 16 33 1362
40 % 16 33 1371
30 % 24 60 568

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures