Sequence Similarity Clusters for the Entities in PDB 1JV2

Entity #1 | Chains: A
INTEGRIN, ALPHA V protein, length: 957 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 11 5256
95 % 7 11 5877
90 % 7 11 5868
70 % 7 11 5728
50 % 7 11 5382
40 % 7 11 5064
30 % 8 13 3630
Entity #2 | Chains: B
PLATELET MEMBRANE GLYCOPROTEIN IIIA BETA SUBUNIT protein, length: 692 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 15727
95 % 8 13 4316
90 % 8 13 4337
70 % 8 13 4256
50 % 8 13 4115
40 % 10 19 1834
30 % 10 19 1773

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.