Sequence Similarity Clusters for the Entities in PDB 1JV2

Entity #1 | Chains: A
INTEGRIN, ALPHA V protein, length: 957 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 11 5108
95 % 7 11 5715
90 % 7 11 5715
70 % 7 11 5588
50 % 7 11 5257
40 % 7 11 4953
30 % 8 13 3559
Entity #2 | Chains: B
PLATELET MEMBRANE GLYCOPROTEIN IIIA BETA SUBUNIT protein, length: 692 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 15348
95 % 8 13 4211
90 % 8 13 4235
70 % 8 13 4156
50 % 8 13 4026
40 % 10 19 1800
30 % 10 19 1743

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.