Sequence Similarity Clusters for the Entities in PDB 1JUQ

Entity #1 | Chains: A,B,C,D
ADP-RIBOSYLATION FACTOR BINDING PROTEIN GGA3 protein, length: 171 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 5324
95 % 1 3 6010 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 1 3 6010
70 % 8 13 1739
50 % 8 14 1669
40 % 8 14 1687
30 % 8 14 1649
Entity #2 | Chains: E,F,G,H
Cation-dependent mannose-6-phosphate receptor protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures