Sequence Similarity Clusters for the Entities in PDB 1JUP

Entity #1 | Chains: A,B,D,E
HYPOTHETICAL TRANSCRIPTIONAL REGULATOR IN QACA 5'REGION protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 13 728
95 % 20 28 365 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.8
PDBFlex
90 % 20 28 389
70 % 20 28 424
50 % 20 28 502
40 % 20 28 543
30 % 20 28 540

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.