Sequence Similarity Clusters for the Entities in PDB 1JUI

Entity #1 | Chains: A,B,C,D
Concanavalin-Br protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 49 60 189
95 % 71 87 147
90 % 73 92 153
70 % 95 116 143
50 % 95 116 171
40 % 95 116 187
30 % 95 116 199
Entity #2 | Chains: P,Q,R,S
10-mer Peptide protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures