Sequence Similarity Clusters for the Entities in PDB 1JUF

Entity #1 | Chains: A
H2-Db major histocompatibility antigen protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 55 206
95 % 6 59 267
90 % 6 61 275
70 % 286 688 6
50 % 286 693 6
40 % 301 743 10
30 % 322 861 15
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 27 133 95
95 % 46 215 64
90 % 46 215 68
70 % 346 879 4
50 % 351 901 3
40 % 351 901 8
30 % 351 901 14
Entity #3 | Chains: C
H13b peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.