Sequence Similarity Clusters for the Entities in PDB 1JUF

Entity #1 | Chains: A
H2-Db major histocompatibility antigen protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 51 222
95 % 6 55 283
90 % 6 57 286
70 % 278 662 7
50 % 278 667 7
40 % 292 715 11
30 % 313 832 15
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 27 131 95
95 % 46 213 66
90 % 46 213 70
70 % 338 857 5
50 % 342 877 5
40 % 342 877 9
30 % 342 877 14
Entity #3 | Chains: C
H13b peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.