Sequence Similarity Clusters for the Entities in PDB 1JUD

Entity #1 | Chains: A
L-2-HALOACID DEHALOGENASE protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 38271
95 % 3 4 17533 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 3 4 17168
70 % 3 4 15947
50 % 4 5 9932
40 % 5 6 7908
30 % 7 8 4739

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.