Sequence Similarity Clusters for the Entities in PDB 1JTZ

Entity #1 | Chains: X,Y,Z
TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 11 protein, length: 171 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 4167
95 % 7 7 4971 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.1
PDBFlex
90 % 9 9 4312
70 % 9 9 4242
50 % 9 9 4075
40 % 9 9 3898
30 % 13 15 1724

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures