Sequence Similarity Clusters for the Entities in PDB 1JTP

Entity #1 | Chains: A,B
Single-Domain Antibody protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44783
95 % 2 5 9757
90 % 2 6 7986
70 % 112 386 9
50 % 153 583 7
40 % 239 936 5
30 % 268 1065 7
Entity #2 | Chains: L,M
LYSOZYME C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 12 4177
95 % 8 13 4552
90 % 476 735 5
70 % 652 955 7
50 % 655 963 8
40 % 665 997 11
30 % 665 997 20

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures