Sequence Similarity Clusters for the Entities in PDB 1JTP

Entity #1 | Chains: A,B
Single-Domain Antibody protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40966
95 % 2 5 8898
90 % 2 6 7248
70 % 93 312 15
50 % 130 495 8
40 % 213 831 5
30 % 241 957 8
Entity #2 | Chains: L,M
LYSOZYME C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 12 3749
95 % 8 13 4131
90 % 438 688 5
70 % 610 904 6
50 % 613 912 6
40 % 623 946 10
30 % 623 946 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.