Sequence Similarity Clusters for the Entities in PDB 1JTP

Entity #1 | Chains: A,B
Single-Domain Antibody protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 41614
95 % 2 5 9032
90 % 2 6 7354
70 % 94 319 12
50 % 131 504 8
40 % 214 844 5
30 % 242 970 7
Entity #2 | Chains: L,M
LYSOZYME C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 12 3806
95 % 8 13 4197
90 % 446 696 5
70 % 618 912 6
50 % 621 920 6
40 % 631 954 10
30 % 631 954 18

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.