Sequence Similarity Clusters for the Entities in PDB 1JTO

Entity #1 | Chains: A,B
Vh Single-Domain Antibody protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 21429
95 % 4 5 9117
90 % 4 6 7432
70 % 203 326 12
50 % 305 509 8
40 % 516 848 5
30 % 580 974 7
Entity #2 | Chains: L,M
Lysozyme protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 572 631 3
95 % 624 684 4
90 % 638 701 5
70 % 849 917 6
50 % 855 925 6
40 % 885 959 11
30 % 885 959 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.