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Degenerate interfaces in antigen-antibody complexes
Sequence Clustering and Redundancy Reduction Results
1JTO
Sequence Clusters for the Sequence Entities in PDB 1JTO
Entity #1: Chains: A,B - Vh Single-Domain Antibody protein, length: 148 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 17638
95% 4 5 7529
90% 4 6 6145
70% 155 221 25
50% 243 362 11
40% 428 636 9
30% 484 747 8
Entity #2: Chains: L,M - Lysozyme protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 465 520 3
95% 513 569 4
90% 527 586 4
70% 737 801 6
50% 744 810 6
40% 774 844 10
30% 774 844 16
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.