Sequence Similarity Clusters for the Entities in PDB 1JTO

Entity #1 | Chains: A,B
Vh Single-Domain Antibody protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 19063
95 % 4 5 8099
90 % 4 6 6618
70 % 172 260 19
50 % 266 420 9
40 % 464 724 5
30 % 521 836 8
Entity #2 | Chains: L,M
Lysozyme protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 506 563 3
95 % 558 616 4
90 % 572 633 5
70 % 782 848 6
50 % 789 857 6
40 % 819 891 10
30 % 819 891 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.