Sequence Similarity Clusters for the Entities in PDB 1JTH

Entity #1 | Chains: A,C
SNAP25 protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 45213
95 % 1 1 33757
90 % 3 16 1687
70 % 3 16 1725
50 % 3 17 1680
40 % 3 17 1695
30 % 3 17 1638
Entity #2 | Chains: B,D
syntaxin 1a protein, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 18 1140
95 % 3 18 1565
90 % 3 18 1597
70 % 3 18 1635
50 % 4 19 1523
40 % 4 19 1549
30 % 5 21 1389

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.