Sequence Similarity Clusters for the Entities in PDB 1JTG

Entity #1 | Chains: A,C
BETA-LACTAMASE TEM protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 9 3127
95 % 28 73 283 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.7
PDBFlex
90 % 35 80 281
70 % 73 126 223
50 % 188 336 74
40 % 199 368 55
30 % 202 375 74
Entity #2 | Chains: B,D
BETA-LACTAMASE INHIBITORY PROTEIN protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 5500
95 % 5 14 2959 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.7
PDBFlex
90 % 5 14 2998
70 % 5 14 2961
50 % 5 14 2917
40 % 5 14 2867
30 % 6 18 2049

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures