Sequence Similarity Clusters for the Entities in PDB 1JTF

Entity #1 | Chains: A
VP39 protein, length: 307 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 37112
95 % 20 22 2525 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 20 22 2585
70 % 20 22 2572
50 % 20 22 2560
40 % 20 22 2521
30 % 20 22 2402

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures