Sequence Similarity Clusters for the Entities in PDB 1JTF

Entity #1 | Chains: A
VP39 protein, length: 307 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 36484
95 % 20 22 2477 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 20 22 2536
70 % 20 22 2523
50 % 20 22 2510
40 % 20 22 2475
30 % 20 22 2361

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.