Sequence Similarity Clusters for the Entities in PDB 1JT0

Entity #1 | Chains: E,F
QACA operator dna, length: 28 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B,C,D
HYPOTHETICAL TRANSCRIPTIONAL REGULATOR IN QACA 5'REGION protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 13 709
95 % 13 28 350 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.8
PDBFlex
90 % 13 28 376
70 % 13 28 412
50 % 13 28 493
40 % 13 28 531
30 % 13 28 531

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.