Sequence Similarity Clusters for the Entities in PDB 1JSP

Entity #1 | Chains: A
tumor protein p53 protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 31328
95 % 1 2 25944
90 % 1 2 25058
70 % 1 2 22745
50 % 1 2 19670
40 % 1 2 17506
30 % 1 2 15031
Entity #2 | Chains: B
CREB-BINDING PROTEIN protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 53 53 413
95 % 60 60 360
90 % 60 60 386
70 % 60 60 422
50 % 60 60 490
40 % 550 550 31
30 % 1097 1099 11

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures