Sequence Similarity Clusters for the Entities in PDB 1JSP

Entity #1 | Chains: A
tumor protein p53 protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 30966
95 % 1 2 25646
90 % 1 2 24777
70 % 1 2 22503
50 % 1 2 19474
40 % 1 2 17338
30 % 1 2 14885
Entity #2 | Chains: B
CREB-BINDING PROTEIN protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 53 53 411
95 % 60 60 351
90 % 60 60 371
70 % 60 60 408
50 % 60 60 484
40 % 540 540 31
30 % 1082 1084 11

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures