Sequence Similarity Clusters for the Entities in PDB 1JSO

Entity #1 | Chains: A
HAEMAGGLUTININ (HA1 CHAIN) protein, length: 325 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 25077
95 % 2 3 21080
90 % 19 71 149
70 % 24 85 154
50 % 42 151 84
40 % 65 279 18
30 % 67 286 28
Entity #2 | Chains: B
HAEMAGGLUTININ (HA2 CHAIN) protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 27020
95 % 19 75 142
90 % 24 86 136
70 % 40 152 46
50 % 65 277 12
40 % 67 287 17
30 % 67 287 29

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.