Sequence Similarity Clusters for the Entities in PDB 1JSO

Entity #1 | Chains: A
HAEMAGGLUTININ (HA1 CHAIN) protein, length: 325 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 24020
95 % 2 3 20203
90 % 19 71 142
70 % 24 85 144
50 % 42 149 76
40 % 57 262 17
30 % 58 268 27
Entity #2 | Chains: B
HAEMAGGLUTININ (HA2 CHAIN) protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 25856
95 % 19 75 135
90 % 24 86 126
70 % 40 150 43
50 % 57 260 11
40 % 59 270 16
30 % 59 270 26

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.