Sequence Similarity Clusters for the Entities in PDB 1JSO

Entity #1 | Chains: A
HAEMAGGLUTININ (HA1 CHAIN) protein, length: 325 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 26707
95 % 2 3 22444
90 % 19 71 159
70 % 24 85 164
50 % 50 174 79
40 % 98 330 17
30 % 100 337 27
Entity #2 | Chains: B
HAEMAGGLUTININ (HA2 CHAIN) protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 28751
95 % 19 75 150
90 % 24 86 142
70 % 48 174 31
50 % 96 325 10
40 % 98 335 15
30 % 98 335 28

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures