Sequence Similarity Clusters for the Entities in PDB 1JSM

Entity #1 | Chains: A
HAEMAGGLUTININ (HA1 CHAIN) protein, length: 325 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24898
95 % 1 3 20924
90 % 6 71 150
70 % 10 85 154
50 % 13 151 84
40 % 16 276 18
30 % 17 282 29
Entity #2 | Chains: B
HAEMAGGLUTININ (HA2 CHAIN) protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 26831
95 % 6 75 142
90 % 10 86 136
70 % 12 152 46
50 % 16 274 11
40 % 16 284 15
30 % 16 284 28

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.