Sequence Similarity Clusters for the Entities in PDB 1JSM

Entity #1 | Chains: A
HAEMAGGLUTININ (HA1 CHAIN) protein, length: 325 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25956
95 % 1 3 21836
90 % 6 71 153
70 % 10 85 157
50 % 13 160 80
40 % 16 307 17
30 % 18 314 26
Entity #2 | Chains: B
HAEMAGGLUTININ (HA2 CHAIN) protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 27949
95 % 6 75 144
90 % 10 86 138
70 % 12 161 45
50 % 16 305 11
40 % 16 315 15
30 % 16 315 27

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.