Sequence Similarity Clusters for the Entities in PDB 1JSD

Entity #1 | Chains: A
HAEMAGGLUTININ (HA1 CHAIN) protein, length: 319 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25146
95 % 1 3 21129
90 % 1 3 20552
70 % 1 3 18953
50 % 6 151 84
40 % 8 279 18
30 % 9 286 28
Entity #2 | Chains: B
HAEMAGGLUTININ (HA2 CHAIN) protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 27019
95 % 1 3 22453
90 % 1 3 21733
70 % 1 3 19926
50 % 8 277 12
40 % 8 287 17
30 % 8 287 29

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.