Sequence Similarity Clusters for the Entities in PDB 1JRR

Entity #1 | Chains: A
PLASMINOGEN ACTIVATOR INHIBITOR-2 protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 33783
95 % 2 4 16315 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.1
PDBFlex
90 % 2 4 15994
70 % 2 4 14939
50 % 2 4 13144
40 % 10 97 374
30 % 12 178 183
Entity #2 | Chains: P
PLASMINOGEN ACTIVATOR INHIBITOR-2 protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.