Sequence Similarity Clusters for the Entities in PDB 1JRP

Entity #1 | Chains: A,C,E,G
xanthine dehydrogenase, chain A protein, length: 462 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 7793
95 % 3 6 2370
90 % 3 6 2431
70 % 3 6 2416
50 % 3 6 2406
40 % 3 6 2380
30 % 3 6 2281
Entity #2 | Chains: B,D,F,H
xanthine dehydrogenase, chain B protein, length: 777 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 2301
95 % 3 6 2342
90 % 3 6 2405
70 % 3 6 2390
50 % 3 6 2385
40 % 14 17 1189
30 % 14 17 1163

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.