Sequence Similarity Clusters for the Entities in PDB 1JRO

Entity #1 | Chains: A,C,E,G
xanthine dehydrogenase, chain A protein, length: 462 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 7800
95 % 1 6 2374
90 % 1 6 2434
70 % 1 6 2420
50 % 1 6 2410
40 % 1 6 2383
30 % 1 6 2284
Entity #2 | Chains: B,D,F,H
xanthine dehydrogenase, chain B protein, length: 777 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 2304
95 % 1 6 2345
90 % 1 6 2407
70 % 1 6 2393
50 % 1 6 2389
40 % 12 17 1191
30 % 12 17 1165

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.