Sequence Similarity Clusters for the Entities in PDB 1JRO

Entity #1 | Chains: A,C,E,G
xanthine dehydrogenase, chain A protein, length: 462 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 7612
95 % 1 6 2307 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 1 6 2372
70 % 1 6 2357
50 % 1 6 2336
40 % 1 6 2323
30 % 1 6 2224
Entity #2 | Chains: B,D,F,H
xanthine dehydrogenase, chain B protein, length: 777 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 2243
95 % 1 6 2280 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 6 2348
70 % 1 6 2331
50 % 1 6 2318
40 % 12 17 1167
30 % 12 17 1144

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.