Sequence Similarity Clusters for the Entities in PDB 1JRI

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L,M,N
Sm-like Archaeal Protein 1 (SmAP1) protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 1181
95 % 5 5 1068 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 5 5 1090
70 % 5 5 1131
50 % 5 5 1171
40 % 5 5 1187
30 % 5 7 1128

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures