Sequence Similarity Clusters for the Entities in PDB 1JRH

Entity #1 | Chains: L
ANTIBODY A6 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 62826
95 % 7 8 7323 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.5
PDBFlex
90 % 8 13 3490
70 % 1928 2474 1
50 % 3912 5011 1
40 % 3912 5011 1
30 % 4665 5941 1
Entity #2 | Chains: H
ANTIBODY A6 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62052
95 % 1 1 43539
90 % 7 8 4625
70 % 1887 2424 2
50 % 3913 5011 1
40 % 3913 5011 1
30 % 4666 5941 1
Entity #3 | Chains: I
INTERFERON-GAMMA RECEPTOR ALPHA CHAIN protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70955
95 % 1 1 48854
90 % 1 1 46273
70 % 1 1 40513
50 % 1 1 34491
40 % 1 1 30431
30 % 1 1 25716

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures