Sequence Similarity Clusters for the Entities in PDB 1JRH

Entity #1 | Chains: L
ANTIBODY A6 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 63801
95 % 7 8 6890 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.4
PDBFlex
90 % 8 13 3506
70 % 1960 2538 1
50 % 3987 5152 1
40 % 4497 5806 1
30 % 5617 7240 1
Entity #2 | Chains: H
ANTIBODY A6 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59675
95 % 1 1 48747
90 % 7 8 4649
70 % 1926 2497 2
50 % 3988 5152 1
40 % 4498 5806 1
30 % 5618 7240 1
Entity #3 | Chains: I
INTERFERON-GAMMA RECEPTOR ALPHA CHAIN protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59676
95 % 1 1 48748
90 % 1 1 46270
70 % 1 1 40583
50 % 1 1 34434
40 % 1 1 30164
30 % 1 1 25188

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures