Sequence Similarity Clusters for the Entities in PDB 1JRH

Entity #1 | Chains: L
ANTIBODY A6 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 62102
95 % 7 8 7226 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.5
PDBFlex
90 % 8 11 4569
70 % 1892 2426 1
50 % 3838 4913 1
40 % 3838 4913 1
30 % 4531 5780 1
Entity #2 | Chains: H
ANTIBODY A6 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61337
95 % 1 1 43057
90 % 7 8 4555
70 % 1851 2376 2
50 % 3839 4913 1
40 % 3839 4913 1
30 % 4532 5780 1
Entity #3 | Chains: I
INTERFERON-GAMMA RECEPTOR ALPHA CHAIN protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70167
95 % 1 1 48329
90 % 1 1 45794
70 % 1 1 40109
50 % 1 1 34151
40 % 1 1 30130
30 % 1 1 25461

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures