Sequence Similarity Clusters for the Entities in PDB 1JRH

Entity #1 | Chains: L
ANTIBODY A6 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60881
95 % 7 8 7074 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.5
PDBFlex
90 % 8 11 4470
70 % 1812 2329 1
50 % 3676 4717 1
40 % 3676 4717 1
30 % 4358 5571 1
Entity #2 | Chains: H
ANTIBODY A6 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60140
95 % 1 1 42258
90 % 7 8 4458
70 % 1774 2282 2
50 % 3677 4717 1
40 % 3677 4717 1
30 % 4359 5571 1
Entity #3 | Chains: I
INTERFERON-GAMMA RECEPTOR ALPHA CHAIN protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68847
95 % 1 1 47496
90 % 1 1 45047
70 % 1 1 39483
50 % 1 1 33643
40 % 1 1 29694
30 % 1 1 25108

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.