Sequence Similarity Clusters for the Entities in PDB 1JRA

Entity #1 | Chains: A,B,C,D
ERV2 PROTEIN, MITOCHONDRIAL protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 15036
95 % 2 2 14035 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.0
PDBFlex
90 % 2 2 13782
70 % 2 2 12897
50 % 2 2 11455
40 % 2 2 10294
30 % 2 2 8789

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures