Sequence Similarity Clusters for the Entities in PDB 1JRA

Entity #1 | Chains: A,B,C,D
ERV2 PROTEIN, MITOCHONDRIAL protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 13707
95 % 2 2 13042 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.0
PDBFlex
90 % 2 2 12831
70 % 2 2 12085
50 % 2 2 10777
40 % 2 2 9775
30 % 2 2 8513

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.