Sequence Similarity Clusters for the Entities in PDB 1JR8

Entity #1 | Chains: A,B
Erv2 PROTEIN, mitochondrial protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 14041
95 % 1 2 13327 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.0
PDBFlex
90 % 1 2 13115
70 % 1 2 12337
50 % 1 2 11004
40 % 1 2 9971
30 % 1 2 8691

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures