Sequence Similarity Clusters for the Entities in PDB 1JQW

Entity #1 | Chains: A
Autoinducer-2 production protein luxS protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 27905
95 % 7 7 10387 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 7 7 10253
70 % 7 7 9721
50 % 7 7 8820
40 % 7 7 8083
30 % 7 7 7123

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.