Sequence Similarity Clusters for the Entities in PDB 1JQQ

Entity #1 | Chains: A,B,C,D
PEROXISOMAL MEMBRANE PROTEIN PAS20 protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 15059
95 % 1 2 14072 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.4
PDBFlex
90 % 1 2 13818
70 % 1 2 11592
50 % 1 2 10358
40 % 1 2 9358
30 % 1 2 8028

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures