Sequence Similarity Clusters for the Entities in PDB 1JQQ

Entity #1 | Chains: A,B,C,D
PEROXISOMAL MEMBRANE PROTEIN PAS20 protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 13502
95 % 1 2 12816 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.4
PDBFlex
90 % 1 2 12609
70 % 1 2 11838
50 % 1 2 10588
40 % 1 2 9603
30 % 1 2 8354

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.