Sequence Similarity Clusters for the Entities in PDB 1JQQ

Entity #1 | Chains: A,B,C,D
PEROXISOMAL MEMBRANE PROTEIN PAS20 protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 14265
95 % 1 2 13509 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.4
PDBFlex
90 % 1 2 13292
70 % 1 2 12498
50 % 1 2 11148
40 % 1 2 10105
30 % 1 2 8811

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures