Sequence Similarity Clusters for the Entities in PDB 1JQM

Entity #1 | Chains: A
50S Ribosomal protein L11 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 19 2590
95 % 16 21 2878
90 % 16 21 2919
70 % 19 24 2425
50 % 224 229 146
40 % 227 232 155
30 % 230 235 166
Entity #2 | Chains: B
Elongation Factor G protein, length: 691 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 25139
95 % 34 34 1106
90 % 35 35 1094
70 % 35 35 1134
50 % 48 48 791
40 % 48 48 824
30 % 50 50 791

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures