Sequence Similarity Clusters for the Entities in PDB 1JQM

Entity #1 | Chains: A
50S Ribosomal protein L11 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 19 2490
95 % 16 21 2788
90 % 16 21 2829
70 % 19 24 2359
50 % 224 229 135
40 % 227 232 149
30 % 230 235 163
Entity #2 | Chains: B
Elongation Factor G protein, length: 691 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 24395
95 % 34 34 1076
90 % 35 35 1063
70 % 35 35 1103
50 % 48 48 771
40 % 48 48 799
30 % 50 50 769

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.