Sequence Similarity Clusters for the Entities in PDB 1JQM

Entity #1 | Chains: A
50S Ribosomal protein L11 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 19 2437
95 % 16 21 2743
90 % 16 21 2788
70 % 19 24 2310
50 % 220 225 136
40 % 223 228 152
30 % 226 231 163
Entity #2 | Chains: B
Elongation Factor G protein, length: 691 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 24047
95 % 34 34 1059
90 % 35 35 1047
70 % 35 35 1085
50 % 48 48 747
40 % 48 48 780
30 % 50 50 740

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.