Sequence Similarity Clusters for the Entities in PDB 1JQM

Entity #1 | Chains: A
50S Ribosomal protein L11 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 19 2399
95 % 16 21 2705
90 % 16 21 2750
70 % 19 24 2282
50 % 212 217 140
40 % 215 220 154
30 % 218 223 168
Entity #2 | Chains: B
Elongation Factor G protein, length: 691 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 23667
95 % 34 34 1041
90 % 35 35 1033
70 % 35 35 1070
50 % 48 48 732
40 % 48 48 768
30 % 50 50 728

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.