Sequence Similarity Clusters for the Entities in PDB 1JQM

Entity #1 | Chains: A
50S Ribosomal protein L11 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 19 2673
95 % 16 21 2969
90 % 16 21 3007
70 % 19 24 2522
50 % 230 235 149
40 % 233 238 159
30 % 236 241 168
Entity #2 | Chains: B
Elongation Factor G protein, length: 691 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26009
95 % 35 35 1103
90 % 36 36 1112
70 % 36 36 1144
50 % 49 49 790
40 % 49 49 827
30 % 51 51 803

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures