Sequence Similarity Clusters for the Entities in PDB 1JQM

Entity #1 | Chains: A
50S Ribosomal protein L11 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 19 2356
95 % 16 21 2655
90 % 16 21 2699
70 % 19 24 2242
50 % 210 215 137
40 % 213 218 150
30 % 216 221 164
Entity #2 | Chains: B
Elongation Factor G protein, length: 691 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 23332
95 % 34 34 1015
90 % 35 35 1006
70 % 35 35 1047
50 % 48 48 708
40 % 48 48 744
30 % 50 50 717

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.