Sequence Similarity Clusters for the Entities in PDB 1JQM

Entity #1 | Chains: A
50S Ribosomal protein L11 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 19 2525
95 % 16 21 2826
90 % 16 21 2867
70 % 19 24 2383
50 % 224 229 141
40 % 227 232 153
30 % 230 235 166
Entity #2 | Chains: B
Elongation Factor G protein, length: 691 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 24839
95 % 34 34 1086
90 % 35 35 1077
70 % 35 35 1116
50 % 48 48 779
40 % 48 48 812
30 % 50 50 777

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.