Sequence Similarity Clusters for the Entities in PDB 1JQK

Entity #1 | Chains: A,B,C,D,E,F
carbon monoxide dehydrogenase protein, length: 639 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 11510
95 % 1 1 11443 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 1 1 11294
70 % 1 1 10706
50 % 14 14 2957
40 % 19 19 1495
30 % 19 19 1477

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures