Sequence Similarity Clusters for the Entities in PDB 1JQJ

Entity #1 | Chains: A,B
DNA polymerase III, beta chain protein, length: 366 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 24350
95 % 43 47 367
90 % 43 47 391
70 % 43 47 431
50 % 45 49 430
40 % 45 49 468
30 % 45 49 462
Entity #2 | Chains: C,D
DNA polymerase III, delta subunit protein, length: 343 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 8 3034
95 % 3 8 3780
90 % 3 8 3814
70 % 3 8 3758
50 % 3 8 3657
40 % 3 8 3507
30 % 3 8 3283

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.