Sequence Similarity Clusters for the Entities in PDB 1JQI

Entity #1 | Chains: A,B
short chain acyl-CoA dehydrogenase protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40524
95 % 1 1 34220 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 2 7652
70 % 2 2 7438
50 % 5 12 1475
40 % 14 35 517
30 % 31 68 276

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures