Sequence Similarity Clusters for the Entities in PDB 1JQ9

Entity #1 | Chains: A,B
Phospholipase A2 protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 31 62 448
95 % 32 68 558 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 32 69 569
70 % 48 113 255
50 % 62 169 141
40 % 95 295 98
30 % 95 295 112
Entity #2 | Chains: P
Peptide inhibitor protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.