Sequence Similarity Clusters for the Entities in PDB 1JQ9

Entity #1 | Chains: A,B
Phospholipase A2 protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 31 62 460
95 % 32 68 587 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 32 69 593
70 % 48 114 261
50 % 62 170 149
40 % 95 296 102
30 % 95 296 114
Entity #2 | Chains: P
Peptide inhibitor protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures